The Department of Genome Sciences is comprised of 27 labs addressing leading edge questions in biology and medicine by developing and applying genetic, genomic and computational approaches taking advantage of genomic information now available for a host of species. The Department of Genome Sciences is making major contributions in the application of genome science to understand the fundamentals of biology and to improve human health and well-being.
Genome Sciences is a collaborative department supported by very different academic disciplines. We work with a multitude of Program Investigators (PIs) in departments both on the UW campus as well as worldwide. The department has gone through significant expansion since its beginning in 2001 with annual grant expenditures doubling between FY08 and FY10 and federal awarding in FY10 of $44M. The department has 41 core training, teaching, and research faculty.
Our DEPARTMENT OF GENOME SCIENCES at the University of Washington has an outstanding opportunity for a TEMPORARY SYSTEMS ANALYST/PROGRAMMER 1 . This individual will be involved in processing of nextgen sequencing data from a DNA sequencing laboratory for submission to national databases Responsibilities include the following:
Support data submission to national repositories
• Manage data submission to various national repositories. This includes tracking which samples need to be submitted and making sure all data files are transferred to the repositories.
• Update and modify programs and scripts as necessary for data submission. This includes modifying perl and/or java code that generates XML for submission to repositories. Submitting data to national databases is a required component for our research program.
• Support robotic workstations by developing scripts for high throughput protocols; the temporary RSE1 will work with a Research Scientist to modify and develop robotics programs.
• Work with laboratory team to efficiently process and track DNA samples.
• Perform routine assessment of data quality and assist with trouble-shooting and daily quality control of data.
Contribute to research project advancement
• Aid in the development of new experimental methods and assist laboratory co-workers and PI in meeting long-term scientific goals
• Attend Genome Sciences and University meetings, retreats, status updates, orientations and planning days when necessary
The successful candidate must demonstrate organization, commitment, the ability to work alone and in complex teams, experience in programming and scripting, and beginner knowledge of DNA sequencing.
Requirements:
Two years of college coursework in computer science or a related field
OR
equivalent education/experience.
• Highly organized and detailed oriented.
• Ability to work as part of a research team in the advancement of
state-of-the-art research in next-generation sequencing.
• Self-motivated with the ability to take initiative and work
independently
• Ambition to produce internationally recognized research
• Excellent communication skills
Desired:
• Bachelors degree in Biology, Molecular Biology, Chemical or Biological Engineering, Life Sciences, or related field.
• Minimum 1 year programming experience.
• Experience in programming (Java, Perl, Python, etc) and scripting.
• Knowledge of genomics, molecular biology, genetics, and/or chemistry.
• Experience working with databases.
• Experience supporting robotic workstations in a laboratory
environment
Condition of Employment:
A satisfactory outcome from a criminal background verification will be required prior to hire.
Application Process:
Part of the application process for this position includes the Employment Eligibility Assessment to obtain additional information that will be used in the evaluation process. If you haven’t already taken this assessment, it will appear on your screen for you to complete as soon as you select "Apply to this Position" on this job announcement. Once you begin the assessment, it must be completed at that time. If you select to take it later, it will appear on your "My Jobs" page to take when you are ready. Please note that your application will not be reviewed, and you will not be considered for this position until the assessment is complete.
The University of Washington is a leader in environmental stewardship & sustainability , and committed to becoming climate neutral.
The University of Washington is an equal opportunity, affirmative action employer. To request disability accommodation in the application process, contact the Disability Services Office at 206-543-6450 / 206-543-6452 (tty) or dso@uw.edu .
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